PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_E2E912AFF.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 74aa    MW: 8309.32 Da    PI: 8.2262
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_E2E912AFF.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM431.4e-133174145
                    NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePw 45
                           lppGfrF P+d+elv++yL kkv++++ +   ++ evd++  ePw
  Traes_2DL_E2E912AFF.1 31 LPPGFRFYPSDQELVCHYLYKKVTNERASQ-GTLVEVDLHAREPW 74
                           79*************************888.78***********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-142774IPR003441NAC domain
PROSITE profilePS5100518.1563174IPR003441NAC domain
PfamPF023653.5E-83274IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    Send to blast
LQASSCWSGG QGRRTGRPGG TMGLREIEST LPPGFRFYPS DQELVCHYLY KKVTNERASQ  60
GTLVEVDLHA REPW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2484803e-83AK248480.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf7e16, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580130.12e-31protein CUP-SHAPED COTYLEDON 1
RefseqXP_020168520.11e-31protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A1D6DH243e-30A0A1D6DH24_WHEAT; Uncharacterized protein
TrEMBLA0A287IVF42e-30A0A287IVF4_HORVV; Uncharacterized protein
TrEMBLA0A446MJ822e-31A0A446MJ82_TRITD; Uncharacterized protein
TrEMBLM7ZGW47e-31M7ZGW4_TRIUA; Protein CUP-SHAPED COTYLEDON 1
STRINGTraes_2DL_E2E912AFF.14e-49(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148451121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.18e-14NAC domain containing protein 100
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]