PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_EFEB56850.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 82aa    MW: 8889.2 Da    PI: 9.9457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_EFEB56850.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.51e-094671126
                    NAM  1 lppGfrFhPtdeelvveyLkkkvegk 26
                           lppGfrFhP+d+elv +yL++k++g 
  Traes_2DL_EFEB56850.1 46 LPPGFRFHPRDHELVLDYLCHKLSGG 71
                           79********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-103471IPR003441NAC domain
PROSITE profilePS5100511.894682IPR003441NAC domain
PfamPF023653.2E-54769IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    Send to blast
YRPRPRPHRV RSCTSLSIQS FSFCACFSAC GKTKMSSSMS MVEARLPPGF RFHPRDHELV  60
LDYLCHKLSG GGGRGGGGGG VD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17179GGRGGGGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3704958e-56AK370495.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2111L02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A446MQ584e-20A0A446MQ58_TRITD; Uncharacterized protein
STRINGTraes_2DL_EFEB56850.16e-53(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.12e-11NAC family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]