PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DS_96B438D92.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 103aa    MW: 11378.7 Da    PI: 6.0939
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DS_96B438D92.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51.1e-118462563
                           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                           ++e+eeL +kv+eL++eN aL+ el++lkk ++ +++++
  Traes_2DS_96B438D92.1  8 QQECEELSRKVAELTTENNALRTELDQLKKACEDMEAQN 46
                           89*********************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF902578.37E-6852No hitNo description
PfamPF001704.9E-9846IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.3E-7848No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    Send to blast
MILSTVYQQE CEELSRKVAE LTTENNALRT ELDQLKKACE DMEAQNAQLM SQEPAAVTTT  60
LGMSIAAPKV QHHDDEGKLH KKANNNSNGK YVGGSHKLEA NPR
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ5773861e-162AJ577386.1 Triticum aestivum partial mRNA for putative HALF-1 transcription factor.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158992.15e-64DNA-binding protein EMBP-1-like isoform X1
RefseqXP_020159000.14e-64DNA-binding protein EMBP-1-like isoform X2
RefseqXP_020159007.14e-64DNA-binding protein EMBP-1-like isoform X3
SwissprotP250323e-13EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A446KY914e-69A0A446KY91_TRITD; Uncharacterized protein
STRINGTraes_2DS_96B438D92.16e-71(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.18e-08G-box binding factor 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]