PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_1B73D2C12.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 79aa    MW: 9097.21 Da    PI: 8.4581
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_1B73D2C12.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY49.96.3e-1613522059
                           S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                           + r+YYrC+++gC+vkk+ver+++d ++v+++Yeg Hnh 
  Traes_3AL_1B73D2C12.1 13 HCRNYYRCSTEGCSVKKRVERDKDDANYVVTMYEGVHNHA 52
                           57*************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182907.19E-141254IPR003657WRKY domain
SMARTSM007741.5E-71353IPR003657WRKY domain
PfamPF031061.2E-111351IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-151354IPR003657WRKY domain
PROSITE profilePS5081117.1091554IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
PKILFNLNFI YYHCRNYYRC STEGCSVKKR VERDKDDANY VVTMYEGVHN HASPGTIYYA  60
AQDPASGRFF VTGTHQLAP
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-112HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195304.14e-39probable WRKY transcription factor 59 isoform X1
RefseqXP_020195305.15e-39probable WRKY transcription factor 57 isoform X2
SwissprotQ93WU91e-18WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLM7Y8I19e-42M7Y8I1_TRIUA; Putative WRKY transcription factor 51
STRINGTraes_3AL_1B73D2C12.14e-54(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.15e-21WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Yan C, et al.
    Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis.
    Mol. Cell, 2018. 70(1): p. 136-149.e7
    [PMID:29625034]