PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_6E92D4E1F.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 80aa    MW: 9117.11 Da    PI: 9.2097
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_6E92D4E1F.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.75e-28869159
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                           ldDg++WrKYGqK++ g+++pr+Y+rCt++   gC + k+v+r++ dp +++++Y+g+H++ 
  Traes_3AL_6E92D4E1F.1  8 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCYASKQVQRAHGDPLLFDVVYHGNHTCA 69
                           59***************************98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.482366IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-27369IPR003657WRKY domain
SuperFamilySSF1182904.45E-26469IPR003657WRKY domain
SMARTSM007742.9E-38870IPR003657WRKY domain
PfamPF031062.8E-26968IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
SVEDVGPLDD GFSWRKYGQK DILGAKYPRA YFRCTHRHTQ GCYASKQVQR AHGDPLLFDV  60
VYHGNHTCAQ GKHSNSQRPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-22568568OsWRKY45
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274011e-131KR827401.1 Triticum aestivum WRKY50 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182144.13e-52probable WRKY transcription factor 53
SwissprotQ8H0Y88e-31WRK41_ARATH; Probable WRKY transcription factor 41
TrEMBLA0A0M3Q8N62e-53A0A0M3Q8N6_WHEAT; WRKY50 transcriptional factor
TrEMBLA0A446NJK92e-53A0A446NJK9_TRITD; Uncharacterized protein
STRINGTraes_3AL_6E92D4E1F.12e-54(Triticum aestivum)
STRINGTRIUR3_29889-P15e-54(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-33WRKY family protein
Publications ? help Back to Top
  1. Wang X, et al.
    Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances.
    Front Plant Sci, 2015. 6: p. 615
    [PMID:26322057]
  2. Duan S, et al.
    Functional characterization of a heterologously expressed Brassica napus WRKY41-1 transcription factor in regulating anthocyanin biosynthesis in Arabidopsis thaliana.
    Plant Sci., 2018. 268: p. 47-53
    [PMID:29362083]