PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AL_2E26DE3F6.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 140aa    MW: 14669.4 Da    PI: 10.1088
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AL_2E26DE3F6.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like60.82.7e-19104140238
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 
                            pr+rWt+ LH++Fv+av+ LGG+e+AtPk++lelm+v
  Traes_4AL_2E26DE3F6.2 104 PRMRWTTALHAHFVQAVQLLGGHERATPKSVLELMNV 140
                            9**********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-15100140IPR009057Homeodomain-like
SuperFamilySSF466891.4E-6101140IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-13104140IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MATAADAPDL SLHISPPSPT GKAGSGRGDE MAISAESTEL CLGFDMATAR QPGEVRNGHS  60
DLEQRLHQPS QIPRFKKSSA DSQAGSSGGA ARSGNGGKKS SRAPRMRWTT ALHAHFVQAV  120
QLLGGHERAT PKSVLELMNV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189915.14e-94probable transcription factor RL9
TrEMBLA0A446R6K11e-96A0A446R6K1_TRITD; Uncharacterized protein
STRINGTraes_4AL_2E26DE3F6.24e-98(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37423168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.21e-20G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]