PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AL_7DCBCAF88.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 34aa    MW: 3740.24 Da    PI: 4.7726
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AL_7DCBCAF88.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.3e-081534120
                           TSSS-HHHHHHHHHHHHHTT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlG 20
                           +g+WTteEd+llv+++++ G
  Traes_4AL_7DCBCAF88.1 15 KGPWTTEEDKLLVNYIQEKG 34
                           79**************9977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.2751034IPR017930Myb domain
SuperFamilySSF466893.82E-51134IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.2E-71334IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 34 aa     Download sequence    Send to blast
MGRSPCCDGE AGVKKGPWTT EEDKLLVNYI QEKG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020162283.12e-15transcription factor MYB39-like
TrEMBLA0A3B6I2G92e-15A0A3B6I2G9_WHEAT; Uncharacterized protein
TrEMBLA0A446RKW13e-15A0A446RKW1_TRITD; Uncharacterized protein
STRINGTraes_4AL_7DCBCAF88.12e-17(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.15e-13myb domain protein 93
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]