PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AS_1A68F2C29.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 404aa    MW: 43614.4 Da    PI: 9.5353
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AS_1A68F2C29.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_162.11.1e-19323385163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+e+k+++rkq+NRe+ArrsR+RK+ae ee + +++ L++eN++Lk+el++l++++++l+se+
  Traes_4AS_1A68F2C29.2 323 EREVKKQKRKQSNRESARRSRLRKQAEWEEVASRADLLKQENSSLKEELKQLQEKCDNLTSEN 385
                            799**********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-241124IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.1E-12163291No hitNo description
Gene3DG3DSA:1.20.5.1706.8E-15318381No hitNo description
PfamPF001707.5E-18323385IPR004827Basic-leucine zipper domain
SMARTSM003388.5E-20323387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.449325388IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-9326382No hitNo description
CDDcd147021.49E-21328379No hitNo description
PROSITE patternPS000360330345IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MGKGDVATRS KSQKSSTAQV CVNKLNCMNN YYHYLTLFYL FQNEQSTPTN PRTAYPDWSQ  60
FQAYYNVPGT AQMTPPAYFH STVTPGPQGH PYMWGPQMMP PYGTPPPYTT MYAQGTPYQQ  120
APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT  180
VKDKTPPAKP LVSSSNEGSS QSESGSGSYS GGSSTNSKSG SHTKDGSEHG PGNDASNKGV  240
TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVS MGVDYWGAPT SVPMHGKAVA  300
APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL  360
KQENSSLKEE LKQLQEKCDN LTSENTSLHE KLKALDSEKP NGNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1339345RRSRLRK
2339346RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524800.0AK252480.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf155l09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189439.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189441.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189442.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189443.10.0bZIP transcription factor 16-like isoform X1
TrEMBLA0A3B6HR480.0A0A3B6HR48_WHEAT; Uncharacterized protein
TrEMBLA0A446QPP80.0A0A446QPP8_TRITD; Uncharacterized protein
STRINGTraes_4AS_1A68F2C29.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-58basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]