PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4AS_F9C171219.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 225aa    MW: 24600.5 Da    PI: 10.1848
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4AS_F9C171219.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.21e-14155197547
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                            +r +r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  Traes_4AS_F9C171219.1 155 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENEQLRS 197
                            6899*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-14150197No hitNo description
SMARTSM003383.6E-12151223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.369153197IPR004827Basic-leucine zipper domain
CDDcd147076.96E-21155196No hitNo description
PfamPF001701.3E-12155197IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-11155197No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDDLLR TAGSARRTAD EVWRDIHGAD  60
GGTSRPRAQM TLEDFLSRPG GDAGGAHWAE QYNPPAPVPV PGQQRHNNVA RPLPRPLGVG  120
AGPVLDALYH DHDGATMSGQ KRAAVGGPGE KTVERRKKRM IKNRESAARS RARKQAYTNE  180
LENKISRLEE ENEQLRSYKA FEPVVHCVPQ QEPKNQLRRR NSASF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3614231e-180AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198083.11e-158ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3B6HUN51e-165A0A3B6HUN5_WHEAT; Uncharacterized protein
TrEMBLA0A446QV491e-165A0A446QV49_TRITD; Uncharacterized protein
STRINGTraes_4AS_F9C171219.11e-166(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-38bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]