PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_4C9A415F3.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 220aa    MW: 24216.8 Da    PI: 10.0053
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_4C9A415F3.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.29.6e-15150192547
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                            +r +r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  Traes_4BL_4C9A415F3.1 150 RRKKRMIKNRESAARSRARKQAYTNELENKISRLEEENEQLRS 192
                            6899*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.8E-15145192No hitNo description
SMARTSM003383.6E-12146218IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.369148192IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.06E-11150192No hitNo description
CDDcd147076.49E-21150191No hitNo description
PfamPF001701.2E-12150192IPR004827Basic-leucine zipper domain
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDNLLX RRTADEVWRD IHGADGGTSR  60
PRAQMTLEDF LSRPGGDAGG AHWAEQYNPP APVPGQQRHN NVGRPLPRPL GVGAGPVLDA  120
LYHDHDHDGA TMSGQKRAAV GGPGEKTVER RKKRMIKNRE SAARSRARKQ AYTNELENKI  180
SRLEEENEQL RSYKAFEPVV HCVPQQEPKN QLRRRNSASF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3614230.0AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198083.11e-151ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A3B6IR571e-158A0A3B6IR57_WHEAT; Uncharacterized protein
STRINGTraes_4BL_4C9A415F3.11e-161(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.33e-37bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]