PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_762F09E09.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 203aa    MW: 21511.8 Da    PI: 4.8367
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_762F09E09.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-17554255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                           ++kGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  Traes_4BL_762F09E09.1  5 QFKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 54
                           69****998.**********7.....335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.5E-29464IPR001471AP2/ERF domain
CDDcd000181.29E-17561No hitNo description
SuperFamilySSF541712.03E-19563IPR016177DNA-binding domain
SMARTSM003809.4E-35568IPR001471AP2/ERF domain
PROSITE profilePS5103221.68562IPR001471AP2/ERF domain
PRINTSPR003671.4E-7617IPR001471AP2/ERF domain
PfamPF008478.4E-11654IPR001471AP2/ERF domain
PRINTSPR003671.4E-72844IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MAARQFKGVR MRSWGSWVSE IRAPHQKRRI WLGSYATPEA AARAYDAALL CLKGSDAVLN  60
FPSSSSASPS SPHSLPSPAN RHADDLSPRS IQRAAAAAAA AFEATRIVVD DSCSSSAEAT  120
TPTSFSVSTL GSADVQEHAT SSMSAAASAG SPVGDQDELW TELDAFASPK LMDLIAAGHA  180
TPFSCTWEEP EEDGDMMRLW SFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3567330.0AK356733.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1039C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189509.15e-95ethylene-responsive transcription factor ERF014-like
TrEMBLA0A3B6IR081e-143A0A3B6IR08_WHEAT; Uncharacterized protein
TrEMBLA0A446S8R61e-143A0A446S8R6_TRITD; Uncharacterized protein
STRINGTraes_4BL_762F09E09.11e-144(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-20ERF family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]