PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_7E9E3A389.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 131aa    MW: 14949.7 Da    PI: 11.8606
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_7E9E3A389.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.8e-09246344
                           SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                           +W+  E e++ +a + +G +    W+++a+ +g g+t+ +++ ++
  Traes_4BL_7E9E3A389.2  2 AWSDAENERFERALATYGRDtagLWERVAAAVGGGKTADDVRRHY 46
                           7*****************99************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.983154IPR017884SANT domain
PfamPF002491.2E-7146IPR001005SANT/Myb domain
CDDcd001675.08E-6246No hitNo description
SMARTSM007170.0079252IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.4E-4247IPR009057Homeodomain-like
SuperFamilySSF466892.37E-8350IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MAWSDAENER FERALATYGR DTAGLWERVA AAVGGGKTAD DVRRHYDLLT GGGRRWQDGR  60
RRQAPLRPAD AGHRRHRVRP LRLPQRRCQQ QHQPQQRQEQ GQPAPDMMGS RGSHSRTKDT  120
YVPSTVRAKL S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGTraes_4BL_7E9E3A389.26e-90(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27038230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-13RAD-like 6
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]