PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_80683C0B9.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 223aa    MW: 25075.9 Da    PI: 7.0889
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_80683C0B9.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.3e-1180139463
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             +  +rk +NR++A+rsR +++++ ++L+ ++++Le+ N+a++ +    +++++ +++++
  Traes_4BL_80683C0B9.1  80 ERQRKRKTSNRLSAQRSRMKRQQREDNLAARAAQLETDNEAMRVTTGLVQQQCSLVEQQN 139
                            4567999**********************************************9888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-1076138No hitNo description
SMARTSM003381.3E-1277141IPR004827Basic-leucine zipper domain
PfamPF001701.3E-879139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.379142IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.75E-881136No hitNo description
CDDcd147023.98E-1582133No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
LLIQSIVVVV VCFLSFYVLV SVPCSSSGLQ VSTFSSAPST TSRSGNCLIR CVSXXXXXXX  60
XXXXXXXXXX XXXXXXTEEE RQRKRKTSNR LSAQRSRMKR QQREDNLAAR AAQLETDNEA  120
MRVTTGLVQQ QCSLVEQQNR VLSADARYLY SLLQQRNSQL RQLGELAGVP MDVQEIPVHL  180
TQLYGGLQTP PAPPLSFPPE IQMMFQPDQL DDIMDDAGSL PWL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186QRKRKT
29499RSRMKR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2508081e-147AK250808.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88n03, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164955.18e-83ocs element-binding factor 1-like
TrEMBLA0A3B6ITY21e-102A0A3B6ITY2_WHEAT; Uncharacterized protein
TrEMBLA0A446S5S71e-102A0A446S5S7_TRITD; Uncharacterized protein
STRINGTraes_4BL_80683C0B9.11e-139(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125042837
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]