PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_4BL_8D44C3C97.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 48aa MW: 5569.37 Da PI: 5.5032

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_4BL_8D44C3C97.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	26.2	2.3e-08	22	46	3	27
NAM 3 pGfrFhPtdeelvveyLkkkvegkk 27 pGfrFhPt+eel+ +yL + + gkk Traes_4BL_8D44C3C97.1 22 PGFRFHPTEEELLGFYLSRVALGKK 46 9******************998887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.07E-8	10	47	IPR003441	NAC domain
PROSITE profile	PS51005	11.908	20	48	IPR003441	NAC domain
Pfam	PF02365	2.3E-5	22	42	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 48 aa Download sequence Send to blast
QVDHLEQQRA MAMGMEVDQD LPGFRFHPTE EELLGFYLSR VALGKKLH

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC140005	2e-33	AC140005.2 Oryza sativa Japonica Group chromosome 3 clone OJA1004C08, complete sequence.
GenBank	AC212416	2e-33	AC212416.1 Oryza glaberrima clone OG_BBa0011M11, complete sequence.
GenBank	AK107090	2e-33	AK107090.1 Oryza sativa Japonica Group cDNA clone:002-121-G12, full insert sequence.
GenBank	AK367376	2e-33	AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15.
GenBank	AK367963	2e-33	AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10.
GenBank	AP014959	2e-33	AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBank	CP012611	2e-33	CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020190294.1	3e-16	NAC domain-containing protein 72-like
Swissprot	Q10S65	1e-14	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A453J386	4e-19	A0A453J386_AEGTS; Uncharacterized protein
STRING	Traes_4BL_8D44C3C97.1	1e-27	(Triticum aestivum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	6e-10	NAC domain containing protein 36

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]