PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BL_F1801E768.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 98aa    MW: 10901.3 Da    PI: 6.9703
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BL_F1801E768.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.99.5e-125998140
               trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmre 40
                           rW+k ev+aLi++r+eme+r+++++ k+plWe++s  mr+
  Traes_4BL_F1801E768.1 59 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRR 98
                           8**********************************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MRTQPQTPPP QPQQHATPTA TEPQPVTPQP QHLQSKEIVV VHAAEQPPVD MAGGASPSRW  60
PKAEVHALIQ LRTEMETRYQ DTAPKGPLWE DISVGMRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3578236e-91AK357823.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1062I19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163611.12e-37trihelix transcription factor GTL1-like
TrEMBLA0A3B6J0713e-59A0A3B6J071_WHEAT; Uncharacterized protein
STRINGTraes_4BL_F1801E768.12e-63(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP152231218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.15e-18Trihelix family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]