PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_4BS_B7A8F8CD8.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 363aa MW: 40334.5 Da PI: 7.0756

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_4BS_B7A8F8CD8.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36	1.5e-11	57	85	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k +rr+++NReAAr+sR+RKka+i++Le Traes_4BS_B7A8F8CD8.1 57 KTTRRLAQNREAARKSRLRKKAYIQQLES 85 789************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-6	53	116	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.071	55	99	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.7E-7	56	98	No hit	No description
Pfam	PF00170	1.4E-8	57	93	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.3E-8	58	101	No hit	No description
PROSITE pattern	PS00036	0	60	75	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.4E-30	137	211	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
MDSSDHHQHQ QQQQQGMVGL VTVSGQFHQI SQQQHQQQKM ATSSTHSDRT GKALDPKTTR 60 RLAQNREAAR KSRLRKKAYI QQLESGKLKL AQLEQDLQRA RSQGLLVGGA PGGNSSPGAA 120 MFDVEYNRWL DDDSRRMIEL RGGLHAHLPD GDLRAIIDDT LTHYDELFRL KSAAARADVF 180 HLITGMWATP AERCFLWMGG FRPSDLLKTL APQLDPLTEQ QMVGICSLEQ SLQQAEEALT 240 QGLEQLHQSL AITVAGSGSL SDDTNMGSFM GDMAVALGKL ANLEGFVIQA DNLRQQTLHQ 300 MHRILTVRQA ARCFLAIGEY HNRLRALSSL WASRPREILM TDDGNCGELS IAAHPSESQY 360 SAY

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

MDSSDHHQHQ QQQQQGMVGL VTVSGQFHQI SQQQHQQQKM ATSSTHSDRT GKALDPKTTR  60
RLAQNREAAR KSRLRKKAYI QQLESGKLKL AQLEQDLQRA RSQGLLVGGA PGGNSSPGAA  120
MFDVEYNRWL DDDSRRMIEL RGGLHAHLPD GDLRAIIDDT LTHYDELFRL KSAAARADVF  180
HLITGMWATP AERCFLWMGG FRPSDLLKTL APQLDPLTEQ QMVGICSLEQ SLQQAEEALT  240
QGLEQLHQSL AITVAGSGSL SDDTNMGSFM GDMAVALGKL ANLEGFVIQA DNLRQQTLHQ  300
MHRILTVRQA ARCFLAIGEY HNRLRALSSL WASRPREILM TDDGNCGELS IAAHPSESQY  360
SAY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK370288	0.0	AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020146200.1	0.0	transcription factor TGAL4-like isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A3B6IS02	0.0	A0A3B6IS02_WHEAT; Uncharacterized protein
STRING	Traes_4BS_B7A8F8CD8.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-139	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]