PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BS_C0031D503.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 140aa    MW: 15915.4 Da    PI: 8.5734
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BS_C0031D503.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like60.73.1e-193488455
                G2-like  4 lrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55
                           lrWt +LH+ F+eave  GG+ +  P ++   +e+m+v gLt+ ++kSHLQ+YR 
  Traes_4BS_C0031D503.1 34 LRWTGDLHKIFLEAVEYQGGPYEVKPTAVkekMEAMGVTGLTIWNIKSHLQRYRE 88
                           89************************88844467889*****************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.17E-112989IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-173389IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-153489IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MSNGKPTYNS DSSYMSSIPV CCFLRAMQPT SSLLRWTGDL HKIFLEAVEY QGGPYEVKPT  60
AVKEKMEAMG VTGLTIWNIK SHLQRYREKC NLGPEPPRDV RGTASPRKAG DGVYGSLMQW  120
NCWICMPLCS LFIYLYFRTD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181145.14e-69protein PHR1-LIKE 3-like isoform X3
TrEMBLA0A446RSG01e-102A0A446RSG0_TRITD; Uncharacterized protein
STRINGTraes_4BS_C0031D503.11e-102(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP154991216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.11e-14G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]