PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DL_631616695.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 85aa    MW: 9447.8 Da    PI: 7.8372
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DL_631616695.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY49.41.8e-15536131162
                  YABBY 131 rfikeeiqrikasnPdishreafsaaaknWah 162
                            + ++eeiqrika+ Pdi hreafs+aaknWa 
  Traes_4DL_631616695.2   5 CALREEIQRIKAAKPDIPHREAFSMAAKNWAK 36 
                            5689***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046902.1E-14737IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010254Biological Processnectary development
GO:0010582Biological Processfloral meristem determinacy
GO:0048479Biological Processstyle development
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
VSCCCALREE IQRIKAAKPD IPHREAFSMA AKNWAKCDPR CSSTVSASNS APEPRIIVPG  60
PQLQERATEQ VVESFDIFKQ MERSA
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5454361e-131AF545436.1 Triticum aestivum CRC-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156144.13e-49protein DROOPING LEAF-like isoform X1
RefseqXP_020156145.13e-49protein DROOPING LEAF-like isoform X2
SwissprotQ76EJ02e-34YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A452XAX69e-50A0A452XAX6_AEGTS; Uncharacterized protein
STRINGTraes_4DL_631616695.22e-55(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59513657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.16e-14YABBY family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]