PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DL_FE7B7E018.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 89aa    MW: 9370.39 Da    PI: 9.7731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DL_FE7B7E018.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-123886155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           s++kGV   + +grW A+I+d      r +r+++g+f  ++ Aa+a+  a+++++g
  Traes_4DL_FE7B7E018.1 38 SRFKGVVPQP-NGRWGAQIYD------RhARVWIGTFPDEDAAARAYNVAALRYRG 86
                           789***9788.8*********......44**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-73886IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-133888IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.7E-153988IPR001471AP2/ERF domain
SMARTSM003801.8E-103989IPR001471AP2/ERF domain
PROSITE profilePS5103218.5183989IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
TESGAAGRLP TTLGLPVAIP DEAVTSRSAS ASAQSASSRF KGVVPQPNGR WGAQIYDRHA  60
RVWIGTFPDE DAAARAYNVA ALRYRGLDA
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3620381e-51AK362038.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2001P16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164922.11e-55AP2/ERF and B3 domain-containing protein Os01g0141000-like
SwissprotQ9LS062e-24RAVL4_ARATH; AP2/ERF and B3 domain-containing transcription factor ARF14
TrEMBLA0A3B6JPB05e-54A0A3B6JPB0_WHEAT; Uncharacterized protein
TrEMBLA0A453J2D04e-54A0A453J2D0_AEGTS; Uncharacterized protein
TrEMBLA0A453J3295e-54A0A453J329_AEGTS; Uncharacterized protein
STRINGTraes_4DL_FE7B7E018.12e-57(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1870756
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25730.11e-16ethylene response DNA binding factor 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]