PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_0684A2454.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 203aa    MW: 22255.4 Da    PI: 8.8231
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_0684A2454.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.16.1e-167372555
                G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           ++AtPktil++m+vkgLtl h+kSHLQkYR+
  Traes_5AL_0684A2454.1  7 KEATPKTILRTMGVKGLTLFHLKSHLQKYRM 37
                           78****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.33E-5738IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.4E-14738IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-10738IPR006447Myb domain, plants
PfamPF143794.7E-2078123IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MLLILSKEAT PKTILRTMGV KGLTLFHLKS HLQKYRMGKQ TGKETPEQSK DGSYLLDAQG  60
GMSLSPRVST QDAKESQEVK EALRAQMEMQ RSLHEQVEVQ KHVDIRMDAY TTYINTLLEK  120
ACKIVSEQFA SSGFSVSDQS LPELSSGGVM CGTATDALSS SVFHQLSVSS INMHSPGGKP  180
SPSGMEGQLL LQRSPEFKRK SSC
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3636650.0AK363665.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2017P09.
GenBankAK3673540.0AK367354.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2055J10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195363.11e-140protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195364.11e-140protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195365.11e-140protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195366.11e-140protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195367.11e-140protein PHR1-LIKE 2-like isoform X2
SwissprotQ94A572e-41PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A446T1N61e-142A0A446T1N6_TRITD; Uncharacterized protein
STRINGTraes_5AL_0684A2454.11e-147(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34273873
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.12e-43G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]