PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_5AL_69A969FF4.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 164aa MW: 18744.6 Da PI: 6.6682

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_5AL_69A969FF4.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	57.6	2.5e-18	33	78	2	45
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSST CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedp 45 Dg++WrKYGqK+++g +++rsYYrCt++ +C+++k v+++++d+ Traes_5AL_69A969FF4.1 33 YDGHQWRKYGQKNINGRQHARSYYRCTYTerNCSATKTVQQQDQDG 78 59************************999*********9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.9E-21	21	106	IPR003657	WRKY domain
SuperFamily	SSF118290	5.1E-18	26	106	IPR003657	WRKY domain
SMART	SM00774	3.7E-23	32	107	IPR003657	WRKY domain
Pfam	PF03106	2.3E-23	34	106	IPR003657	WRKY domain
PROSITE profile	PS50811	16.455	34	94	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MDEQAKPSCI VGRKRRRNDG KRSRSLVTNV PHYDGHQWRK YGQKNINGRQ HARSYYRCTY 60 TERNCSATKT VQQQDQDGGG SIYSADAGED QGAKYTVVYY GDHTCKAGDN ISNNIIDHLP 120 NLVDIDLRRG ETERVTAEIS EFDMELDVPA LLEVFNNSQL NWEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	12	16	RKRRR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU669661	1e-104	EU669661.1 Triticum aestivum WRKY31 gene, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010239551.3	1e-61	probable WRKY transcription factor 66
TrEMBL	A0A3B6KGV8	1e-121	A0A3B6KGV8_WHEAT; Uncharacterized protein
STRING	Traes_5AL_69A969FF4.1	1e-121	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3258	30	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66550.2	2e-14	WRKY DNA-binding protein 67

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]