PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_7164FEAC3.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 83aa    MW: 9313.62 Da    PI: 10.3053
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_7164FEAC3.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.61.4e-194583138
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38
                           ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv
  Traes_5AL_7164FEAC3.1 45 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKV 83
                           58***************************99******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.814083IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-184083IPR003657WRKY domain
SuperFamilySSF1182901.27E-164183IPR003657WRKY domain
SMARTSM007746.3E-84583IPR003657WRKY domain
PfamPF031063.5E-154683IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
SNRNVGTGEA EHVDVDSPLS NGTCRRIKVK KVCTRIDPSD TSLVVKDGYQ WRKYGQKVTR  60
DNPSPRAYFR CAFAPSCPVK KKV
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243111e-137JX424311.1 Triticum monococcum WRKY transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020147443.17e-53WRKY transcription factor WRKY76-like
SwissprotQ6IEK54e-39WRK76_ORYSI; WRKY transcription factor WRKY76
TrEMBLM7Z3T72e-53M7Z3T7_TRIUA; Putative WRKY transcription factor 40
STRINGTraes_5AL_7164FEAC3.14e-55(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-27WRKY DNA-binding protein 40
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]