PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_9BC38814C.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 139aa    MW: 15347.1 Da    PI: 8.2448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_9BC38814C.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_182.35.3e-263396164
                           XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
                 bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64
                           e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +L++el++lkk ++++++e++
  Traes_5AL_9BC38814C.1 33 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENK 96
                           89*********************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-182592No hitNo description
SMARTSM003381.0E-213397IPR004827Basic-leucine zipper domain
PfamPF001701.1E-233396IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.0593598IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-123691No hitNo description
CDDcd147022.83E-163888No hitNo description
PROSITE patternPS0003604055IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MDPLSASPSS LVQGEVNAAA SSQSNASLSQ MDERELKRER RKQSNRESAR RSRLRKQQEC  60
EELAQKVSEL TAANGTLRSE LDQLKKDCKT METENKKLMG KILSHDDKMQ QSEGPSVVTT  120
LSIQVEAPEP HQGGHGKAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14955RRSRLRK
24956RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00665SELEX26531826Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTEMGCF130.0M62893.1 Triticum aestivum DNA binding protein (EmBP-1b) mRNA, complete cds.
GenBankWHTHBP1A10.0D12919.2 Triticum aestivum mRNA for transcription factor HBP-1a(1), partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175793.13e-80DNA-binding protein EMBP-1
SwissprotP250321e-96EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A3B6KRS43e-94A0A3B6KRS4_WHEAT; Uncharacterized protein
TrEMBLA0A3B6KS123e-94A0A3B6KS12_WHEAT; Uncharacterized protein
TrEMBLA0A3B6KSH33e-94A0A3B6KSH3_WHEAT; Uncharacterized protein
STRINGTraes_5AL_9BC38814C.17e-96(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.17e-23basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Guiltinan MJ,Marcotte WR,Quatrano RS
    A plant leucine zipper protein that recognizes an abscisic acid response element.
    Science, 1990. 250(4978): p. 267-71
    [PMID:2145628]
  2. Niu X,Guiltinan MJ
    DNA binding specificity of the wheat bZIP protein EmBP-1.
    Nucleic Acids Res., 1994. 22(23): p. 4969-78
    [PMID:7800488]
  3. Mikami K,Sakamoto A,Iwabuchi M
    The HBP-1 family of wheat basic/leucine zipper proteins interacts with overlapping cis-acting hexamer motifs of plant histone genes.
    J. Biol. Chem., 1994. 269(13): p. 9974-85
    [PMID:8144592]