PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_E9FE08F07.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 48aa    MW: 5492.17 Da    PI: 11.1783
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_E9FE08F07.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.98.9e-121044138
                    AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38
                           s+y+GV +++ +grW+A+I   +   g +k+ +lg++gt
  Traes_5AL_E9FE08F07.1 10 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGT 44
                           89****99**********99966...3.6*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.3E-81044IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-71045IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-61144IPR001471AP2/ERF domain
PROSITE profilePS510329.9141148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 48 aa     Download sequence    Send to blast
KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG TYGTYSTL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027121366.13e-25ethylene-responsive transcription factor WRI1-like
RefseqXP_027174086.11e-25AP2-like ethylene-responsive transcription factor At1g79700
SwissprotQ94AN43e-24AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A068V5Q43e-24A0A068V5Q4_COFCA; Uncharacterized protein
STRINGXP_009360494.16e-24(Pyrus x bretschneideri)
STRINGPGSC0003DMT4000367071e-24(Solanum tuberosum)
STRINGPGSC0003DMT4000877455e-24(Solanum tuberosum)
STRINGTraes_5AL_E9FE08F07.12e-26(Triticum aestivum)
STRINGXP_004298447.16e-24(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.25e-22ARIA-interacting double AP2 domain protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  3. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]