PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AS_12F8B3DEF.3
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 111aa    MW: 11942.7 Da    PI: 5.0994
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AS_12F8B3DEF.3genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.42.3e-111223556
                G2-like 35 lmkvkgLtlehvkSHLQkYRla 56
                           +mkv+gLt+++vkSHLQkYRl+
  Traes_5AS_12F8B3DEF.3  1 MMKVDGLTNDEVKSHLQKYRLH 22
                           7*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-10125IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-8222IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MMKVDGLTND EVKSHLQKYR LHTRRASDGE QQQSASAGQW PRPEQYTTSQ HSSSQSGSPQ  60
GPLQLTVSSR GMSVTAGDSC DGGEENEEED GKSASYSWGM QQNGTKASSS S
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519511e-160JF951951.1 Triticum aestivum clone TaMYB68 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151221.12e-49myb family transcription factor EFM-like
SwissprotF4JRB09e-11HHO5_ARATH; Transcription factor HHO5
TrEMBLA0A3B6KC443e-72A0A3B6KC44_WHEAT; Uncharacterized protein
TrEMBLA0A3B6KDA42e-72A0A3B6KDA4_WHEAT; Uncharacterized protein
TrEMBLA0A446SR037e-73A0A446SR03_TRITD; Uncharacterized protein
TrEMBLA0A446SRA63e-72A0A446SRA6_TRITD; Uncharacterized protein
STRINGTraes_5AS_12F8B3DEF.33e-75(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.15e-13G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]