PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_4DD00FF4B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 133aa    MW: 14839.7 Da    PI: 10.9835
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_4DD00FF4B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.75e-1362114153
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                            e++++r+rrk +NR++A+rsR+RK++++eeL+  v+ + ae ++L+ +l +  
  Traes_5BL_4DD00FF4B.1  62 EERRRRQRRKVSNRLSAQRSRARKQQRLEELRGTVARFRAEKRDLAAKLHTVA 114
                            6889******************************************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-859113No hitNo description
SMARTSM003385.3E-760126IPR004827Basic-leucine zipper domain
PfamPF001706.2E-962114IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.11764127IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-866114No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
CDDcd147029.34E-971116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MLSLQEAIGL DMDAMTSGFG FTPWEADTCP TLEELMAASS TSSPSSSGGA VADQAGMVED  60
EEERRRRQRR KVSNRLSAQR SRARKQQRLE ELRGTVARFR AEKRDLAAKL HTVARHELAV  120
RRQNARLRAE AAV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156626.12e-67ocs element-binding factor 1-like
TrEMBLA0A3B6LTU12e-88A0A3B6LTU1_WHEAT; Uncharacterized protein
TrEMBLA0A446UNI32e-88A0A446UNI3_TRITD; Uncharacterized protein
STRINGTraes_5BL_4DD00FF4B.15e-90(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]