PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_883AD53FB.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 134aa    MW: 13165.1 Da    PI: 7.9569
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_883AD53FB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.83.1e-101203655
                G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                           m+vk+Ltl+hvkSHLQ+YR+
  Traes_5BL_883AD53FB.1  1 MNVKDLTLAHVKSHLQMYRT 20
                           9******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-8120IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MNVKDLTLAH VKSHLQMYRT VKGTDRSSQI ATGEQQMMVV DAGGGRGCGG GGGGGVVATL  60
PACDVDMAGF CGAPAAAAAS APPAATTSSA AHFLCASATG AAAAAAAPLV ALVPSPPPPP  120
IPPRYVWMST NITY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14351GGRGCGGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3741181e-160AK374118.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3054O18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193685.12e-29uncharacterized protein LOC109779471
TrEMBLA0A3B6LTR61e-77A0A3B6LTR6_WHEAT; Uncharacterized protein
TrEMBLA0A446UNI21e-77A0A446UNI2_TRITD; Uncharacterized protein
STRINGTraes_5BL_883AD53FB.17e-91(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP65543750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.15e-11G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]