PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_1733FB4DA.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 1100aa    MW: 123464 Da    PI: 6.7576
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_1733FB4DA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.75.6e-24802862259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDg++WrKYGqK++ gs++pr+YYrCt++   gC++ k+++ ++ dp +++ +Y g+H+++
  Traes_5DL_1733FB4DA.1 802 DDGFSWRKYGQKDILGSRNPRGYYRCTHHntrGCQALKQLQATDGDPLLFNAIYVGNHTCT 862
                            8***************************98999**************************97 PP
2WRKY825.9e-26917977259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDgy+W KYGqK++ gs++pr+YYrC ++   gC+++k+v+rs++d+++++++Y+geH++ 
  Traes_5DL_1733FB4DA.1 917 DDGYSWSKYGQKDILGSKHPRGYYRCVHRpekGCEATKQVQRSDSDTQLFDVVYHGEHTCA 977
                            8***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525407.17E-3212189IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009315.0E-4215215IPR002182NB-ARC
PRINTSPR003643.1E-72640No hitNo description
PRINTSPR003643.1E-7123137No hitNo description
SuperFamilySSF520581.7E-21254619IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.104.7E-15275572IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003643.1E-7478494No hitNo description
Gene3DG3DSA:2.20.25.806.8E-24788862IPR003657WRKY domain
SuperFamilySSF1182906.8E-22795862IPR003657WRKY domain
PROSITE profilePS5081120.53796859IPR003657WRKY domain
SMARTSM007741.5E-33801863IPR003657WRKY domain
PfamPF031061.0E-21802861IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.0E-27903977IPR003657WRKY domain
SuperFamilySSF1182901.96E-23909977IPR003657WRKY domain
PROSITE profilePS5081122.114911974IPR003657WRKY domain
SMARTSM007743.9E-36916978IPR003657WRKY domain
PfamPF031063.4E-25917976IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1100 aa     Download sequence    Send to blast
MLSQVRPHQT SHTWKLHSLI ADIRTHLQDK RYLIVIDDVW ATQTWDIVSR ALPDGNLCSG  60
VLITTEIDDV ALKCGGYDSK YVLPMKPLGH DDSSKLFFRT AFGPQYECPP ELSDVANNII  120
RKCAGFPLAV VTVAGLLVNQ MGKPEQWDFV NKSLGYGLRK NPAPEGMKQV LNLSYNNLRL  180
HLKACLMYLS IYEEDYIIQK NDLVKQWIAE GFIHATEEKD MVEISRICFD ELISSRMIEP  240
VHINDTGDVL SCTVHHMVLD FITHKSLEEN FVTAIDHCQT TARLADKVRR LSLHFGNAEA  300
TPPTNMRLSQ VRTLAYFGVI KCLPSIVEFG LLQILILHLW GDDDSISFDL TGISELFRLR  360
YLHVTCNATL EVPQTQIRGL RYLETLKIDA RVSAVPSDIV HLPGLLHLSL PVEINLPNGI  420
GRMTSLCTLE CFDISVNSVE NVHSLGELTN LHDLRLTCST VHSCYLTSKM DSMCSILTKL  480
SNLRSLTLEP SSILDVGPSS MSISCDGLSS VSSPPACLQT FEWLPRICTF SSLPKWIGRL  540
SKLCILKIGV RKLANNDFDI LRGLPALTVL SLHIRTKPAK RILFNKIGFS VLKYFKFRCR  600
APWLEFEVDA MPNLLKLKLR FDAHGVDQHG TIPVGIVHLT GLKEMSAKIG GAGANDPDRR  660
AAESALIDAI KMHPACPTLS IHCLDAMFSG EDDDIKKEDS IEHMTLQKQY DVKKEDSIEH  720
MTLQKQYGIK KEDSIEHTTL QEQYDIKNED LIEHMTLQIQ NDIKKEDSYK QHGFLQKDYR  780
KTLPKWSTQV RVSSLQDIEG HDDGFSWRKY GQKDILGSRN PRGYYRCTHH NTRGCQALKQ  840
LQATDGDPLL FNAIYVGNHT CTQGANSQPQ PGYEQSSISV GDKAEGSIQR LEKMPPRRSK  900
RSIQVRVRSM QDDYPADDGY SWSKYGQKDI LGSKHPRGYY RCVHRPEKGC EATKQVQRSD  960
SDTQLFDVVY HGEHTCAENV HSRGESARSL PHHVSVSAGV IPPATSESQV TYEAVSSGST  1020
AGIHFMSPAT SAGSQVTYES GSRSTTTGRF ISPGMSESQV AYAEFWTWPN NVDFMLNSPI  1080
NERLDLNADF VDETGPSDFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C3e-3318271248504Disease resistance RPP13-like protein 4
6j5t_F3e-3318271248504Disease resistance RPP13-like protein 4
6j5t_G3e-3318271248504Disease resistance RPP13-like protein 4
6j5t_L3e-3318271248504Disease resistance RPP13-like protein 4
6j5t_O3e-3318271248504Disease resistance RPP13-like protein 4
6j5u_A3e-3318271248504Disease resistance RPP13-like protein 4
6j5v_A3e-3318271248504Disease resistance RPP13-like protein 4
6j5w_A3e-3318271248504Disease resistance RPP13-like protein 4
6j6i_C3e-3318271248504Disease resistance RPP13-like protein 4
6j6i_F3e-3318271248504Disease resistance RPP13-like protein 4
6j6i_G3e-3318271248504Disease resistance RPP13-like protein 4
6j6i_L3e-3318271248504Disease resistance RPP13-like protein 4
6j6i_O3e-3318271248504Disease resistance RPP13-like protein 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1959310.0KF195931.1 Triticum aestivum WRKY transcription factor 41 (WRKY41) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020161814.10.0putative disease resistance RPP13-like protein 2 isoform X1
TrEMBLA0A453LJ220.0A0A453LJ22_AEGTS; Uncharacterized protein
STRINGTraes_5DL_1733FB4DA.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27511933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.27e-32WRKY family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]