PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_1950C1FC2.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 525aa    MW: 58681.2 Da    PI: 7.1381
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_1950C1FC2.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.4e-11205237133
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                            e++ k  rr+++NReAAr+sR+RKka+i++Le 
  Traes_5DL_1950C1FC2.2 205 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLES 237
                            6777999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-8203250No hitNo description
SMARTSM003380.0016205258IPR004827Basic-leucine zipper domain
PfamPF001703.9E-8206237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002207249IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.8E-7209250No hitNo description
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
PfamPF141441.4E-28311385IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MMMSEGQGQQ EIISQQHQQQ QQQQPLEMDI TFGMSSHQHH HAPPSSSSSS SMHAAAASFM  60
SSKEASGVYD HLGELDQALF MYLDHGHAST QQEQRQTLNI FPSQPMHVEP SPKGDLGLVL  120
SPAPVGSKMP SPDHHHHHHQ QQAAAAAMEE LAAGSRRQQQ EHHLHLQHQQ QQPAFATAES  180
AGVSNNKDVK PLTKKEHKRG LSTGERDPKT LRRLAQNREA ARKSRLRKKA YIQQLESSRI  240
RLAQIEQELH SARAQGVLYP GSSLLAEQGI AGKGLGGIDG LSSVIRSNWP AEAAMFDVEY  300
ARWQEEHNRL MYELRAALQQ HLPEGELQMY VESCLAHHDE VLAIKDAVIK GDVFHLISGV  360
WRSPAERCFL WLGGFRPSEV IKMVLSHVDP LTEQQIVAVY GLQQSAVQTE EALSQGLDTL  420
YQALSDTVVS DALTCCSTPN VSNYMGQMGL AVHKLTTLEG FVRQAEKLRQ QMLHRLHQVL  480
TARQMARSLL AVSDYFHRLR VLSSFWVNRN RMAPQDQQLE AGPHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3756510.0AK375651.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3100G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159963.10.0transcription factor TGA2-like isoform X1
SwissprotQ52MZ21e-156TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A3B6MTF90.0A0A3B6MTF9_WHEAT; Uncharacterized protein
STRINGTraes_5DL_1950C1FC2.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-134bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]