PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_75AEE92BB.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 213aa    MW: 22676.2 Da    PI: 9.2441
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_75AEE92BB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_179.92.9e-25107170164
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                            e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +Lk+el++lkk ++++++e++
  Traes_5DL_75AEE92BB.1 107 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLKSELDQLKKDCKTMETENK 170
                            89*********************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-1999167No hitNo description
SMARTSM003387.4E-22107171IPR004827Basic-leucine zipper domain
PfamPF001705.9E-23107170IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.024109172IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.02E-11110165No hitNo description
CDDcd147024.94E-18112162No hitNo description
PROSITE patternPS000360114129IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
KGDTGANQKG SSSSAKRRKS GAANTEGEPS QAATVQNAAT QPPLEDKERS ASKLLVLAPG  60
RAALPSAAPN LNIGMDPLSA SPSSLVQGEV NAAASSQSNA SLSQMDEREL KRERRKQSNR  120
ESARRSRLRK QQECEELAQK VSELTAANGT LKSELDQLKK DCKTMETENK QLMGKILSHD  180
DKMQQSEGPS VVTTLSIQVE APEPHQGGDG KAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129RRSRLRK
2123130RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankTAU079330.0U07933.1 Triticum aestivum Chinese spring DNA-Binding protein (EmBP-1a) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175793.11e-148DNA-binding protein EMBP-1
SwissprotP250321e-125EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A3B6MZ121e-149A0A3B6MZ12_WHEAT; Uncharacterized protein
STRINGTraes_5DL_75AEE92BB.11e-150(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-25basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]