PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_9935B1BF4.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 334aa    MW: 36429.1 Da    PI: 8.7071
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_9935B1BF4.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11179207533
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                            k  rr+++NReAAr+sR+RKka+i++Le+
  Traes_5DL_9935B1BF4.2 179 KTLRRLAQNREAARKSRLRKKAYIQQLET 207
                            7789***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.7E-4175230IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-8176220No hitNo description
PROSITE profilePS502178.749177220IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.81E-7179212No hitNo description
PfamPF001701.5E-8179207IPR004827Basic-leucine zipper domain
PROSITE patternPS000360182197IPR004827Basic-leucine zipper domain
PfamPF141447.5E-26265334IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MGGIREEDHH HHQPSELPLG FRSAPPPPMI ASSSMSKEST SYDMADFDQT AIFLYLDGHD  60
PQSIQEQRQT LNIFPSQPMH AAEPLNPAAK INGGAVMAAM LANGGNPQQA SPKRPEQQQL  120
VLQGAAGGPN ATPLLTGSAK DNKNSASLIK KEGTSSGKGA TSSSTDPDRE GSRRTQDPKT  180
LRRLAQNREA ARKSRLRKKA YIQQLETSRI RLSQIEQQVQ AGRVQGVLLG AGDHHQGLPS  240
APSFAGMFDV EYGRWVEEHS KLIFQLRALL NDNAPDNQVQ VLVGGAMAHH EELLNLKAAI  300
ARTDIFHLLC GVWASPAERC FLWLGGFRPT EFIK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524000.0AK252400.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf157i09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190892.10.0transcription factor TGAL7-like
SwissprotQ6H4341e-154TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLM8BP470.0M8BP47_AEGTA; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGEMT237290.0(Aegilops tauschii)
STRINGTraes_5DL_9935B1BF4.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.33e-69bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]