PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AL_2CA7515B31.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 123aa    MW: 13433.8 Da    PI: 8.5453
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AL_2CA7515B31.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.96.6e-101351956
                     AP2 19 Irdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                            Irdp    +r  r +lg+f+ta eAa+a++ a+++++g+
  Traes_6AL_2CA7515B31.2  1 IRDP----HRaVRKWLGTFDTAAEAARAYDVAALEFRGH 35
                            6664....14689************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.2E-12148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.4E-19143IPR001471AP2/ERF domain
PROSITE profilePS5103215.962142IPR001471AP2/ERF domain
CDDcd000186.29E-17142No hitNo description
SuperFamilySSF541711.05E-12144IPR016177DNA-binding domain
PfamPF008471.1E-5835IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
IRDPHRAVRK WLGTFDTAAE AARAYDVAAL EFRGHRAKLN FPASSSAASA SASASASSWA  60
AAQPHPQRQQ RPESPREKCG SNASSPAHVP EQGRPVAREQ EIWDGLHEIM MMDDGSFWSN  120
PKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3748264e-74AK374826.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3077G12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193084.16e-56ethylene-responsive transcription factor ERF109-like
TrEMBLA0A446VPA64e-67A0A446VPA6_TRITD; Uncharacterized protein
STRINGTraes_6AL_2CA7515B31.22e-84(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124236124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.12e-11ERF family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]