PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AS_84E7FEDB3.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 218aa    MW: 22455.2 Da    PI: 9.39
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AS_84E7FEDB3.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.51.9e-0940771555
                    AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           Wv+eIr p   g+++r++lg++ ta+ Aa+a++a  ++l+g
  Traes_6AS_84E7FEDB3.1 40 WVSEIRAP---GQKTRIWLGSHSTAKAAARAYDATLLCLKG 77
                           *******8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.1582087IPR001471AP2/ERF domain
SMARTSM003801.1E-103993IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-173987IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-104088IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
GGQTVADAQP AGAGRRSRRS RPGAGRARLQ PARVECSLAW VSEIRAPGQK TRIWLGSHST  60
AKAAARAYDA TLLCLKGASA AADLNFPVRF PFDLPAAAMS PKSIQRVGAA AAAAGASAYV  120
FDLAGADDSA SANAVDFTGA DYSASAVTPE YYSSSGDASP VSSPETASSG TTDLDGVDLL  180
CRCSHRPSSR CQPRCLLHVR RNARANMAKC VKPPVGCT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3708701e-119AK370870.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2118P17.
GenBankAK3761001e-119AK376100.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3114M17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156807.11e-56ethylene-responsive transcription factor ERF014-like
TrEMBLA0A446X6U59e-58A0A446X6U5_TRITD; Uncharacterized protein
STRINGTraes_6AS_84E7FEDB3.11e-154(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-15ERF family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]