PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AS_9916DDE4D.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 234aa    MW: 25677.9 Da    PI: 10.3975
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AS_9916DDE4D.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.55e-12159194338
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                            + k  rr+++NReAAr+sR+RKka+i++Le+    L
  Traes_6AS_9916DDE4D.2 159 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRVRL 194
                            67999************************9844333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-6157213IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-9157203No hitNo description
PROSITE profilePS502178.898159203IPR004827Basic-leucine zipper domain
PfamPF001702.9E-9160201IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-8163203No hitNo description
PROSITE patternPS000360164179IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MGDRPWQQPH EQASCSAHAE MIQASTAATS SIHGSIIRKD PGGYEDLAEL DQALFLYINS  60
QDNQSVQEQP HFSSRVHVET LNIFPSRPMH VVAEPSPKAA TSTSNIVAAS SNLKPQRPPS  120
KQSAMTAPGG KATVKREGSG SGGAGTPSTS EHEGPRTPDA KTLRRLAQNR EAARKSRLRK  180
KAYIQNLETS RVRLSQMEQE MQRCSAQVCI LSIPRGKNKK GKVQRYKIDL DMNH
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689311e-180AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178468.11e-136transcription factor TGAL9-like isoform X1
SwissprotQ0E3423e-60TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLA0A446VAV41e-173A0A446VAV4_TRITD; Uncharacterized protein
STRINGTraes_6AS_9916DDE4D.21e-174(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.33e-34bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]