PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6BL_53201E1DB.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 70aa    MW: 7581.29 Da    PI: 4.8893
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6BL_53201E1DB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.91.4e-101203655
                G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                           m+vk+Ltl+hvkSHLQ+YR+
  Traes_6BL_53201E1DB.1  1 MDVKDLTLAHVKSHLQMYRT 20
                           9******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-9120IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MDVKDLTLAH VKSHLQMYRT IKTTDHKPAA ASSYGQAKTI IDIPDDSSFD IANTSGSESS  60
VQQSNLDGNE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156181.12e-42probable transcription factor KAN2 isoform X3
TrEMBLA0A453PBI43e-43A0A453PBI4_AEGTS; Uncharacterized protein
STRINGEMT122024e-43(Aegilops tauschii)
STRINGTraes_6AL_B2256B77F.23e-41(Triticum aestivum)
STRINGTraes_6BL_53201E1DB.13e-44(Triticum aestivum)
STRINGTraes_6DL_DB1546316.11e-40(Triticum aestivum)
STRINGTRIUR3_34123-P14e-43(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94383445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-13G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]