PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6DS_FD90D1145.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 227aa    MW: 25465.1 Da    PI: 9.8798
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6DS_FD90D1145.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51e-11181213335
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekv 35 
                            + k  rr+++NReAAr+sR+RKka+i++Le+  
  Traes_6DS_FD90D1145.2 181 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSR 213
                            67999************************9744 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8179224No hitNo description
SMARTSM003380.0053179226IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.898181225IPR004827Basic-leucine zipper domain
PfamPF001704.7E-9182221IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7183223No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MDMFNKNLKV YFIQAFPLSV ILFLEVMILS LGPLKTYIYI CEPQLIRNDD HDNLFAIFRY  60
INLFKCSRKD PGGYEDLAEL DQALFLYINS QDQQSVQEQP QTLNIFPSRP MHVVAEPSPK  120
AATSTSNIVA ASSNLKPQRP PSKQSAMTAP GGKATVKREG SGSGGAGTPS TSEHEGPRTP  180
DAKTLRRLAQ NREAARKSRL RKKAYIQNLE TSRVRLSQME QEMQRCS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689310.0AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178470.11e-110transcription factor TGAL9-like isoform X3
SwissprotQ0E3427e-52TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLR7W9161e-112R7W916_AEGTA; Transcription factor HBP-1b(C38)
STRINGTraes_6DS_FD90D1145.21e-169(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.35e-29bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]