PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_01C8BD51A.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 65aa    MW: 6588.18 Da    PI: 7.3496
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_01C8BD51A.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82254.74.2e-1716561123
                 DUF822  61 vvedDGttyrkgskpleeaeaag.ssasaspesslq.sslkssalaspvesysaspksssfpsps 123
                            vvedDGttyrkg+kp+++   +g ss  +s +ss+q +s+ ss+++spv+sy++sp+sssfpsp+
  Traes_7AL_01C8BD51A.1   1 VVEDDGTTYRKGYKPPSSGPFGGvSSMGMSSCSSSQvLSAPSSSFPSPVPSYHPSPTSSSFPSPT 65 
                            7***************6666655155569*******9**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.5E-15165IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    Send to blast
VVEDDGTTYR KGYKPPSSGP FGGVSSMGMS SCSSSQVLSA PSSSFPSPVP SYHPSPTSSS  60
FPSPT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN4007393e-76JN400739.1 Triticum aestivum cultivar Chinese Spring BES1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151437.12e-15protein BZR1 homolog 1
TrEMBLA0A446M3E31e-19A0A446M3E3_TRITD; Uncharacterized protein
STRINGTraes_7AL_01C8BD51A.12e-35(Triticum aestivum)
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]