PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_20FA90AE5.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 96aa    MW: 11629.3 Da    PI: 10.7304
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_20FA90AE5.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.93.7e-1060963167
                    NAM 31 eevikevdiykvePwdLpkkvkaeekewyfFskrdkk 67
                           + +i++v+++k+ePw+Lp+k++ +ekewyf+s++d+k
  Traes_7AL_20FA90AE5.1 60 TAAIEDVNLNKYEPWELPEKAEMGEKEWYFYSRKDRK 96
                           357***************99999***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100510.7743296IPR003441NAC domain
SuperFamilySSF1019412.75E-96096IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
LRPIFPSSQN PLHRKSLSWK TTCKFRTNSW CYHRGLGSTR RKRRSSNSMW SPRCKIIFVT  60
AAIEDVNLNK YEPWELPEKA EMGEKEWYFY SRKDRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGTraes_7AL_20FA90AE5.18e-66(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.11e-14NAC family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]