PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_6279FCE8B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 208aa    MW: 22609.9 Da    PI: 10.876
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_6279FCE8B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.94.6e-081213656
                G2-like 36 mkvkgLtlehvkSHLQkYRla 56
                           m++++Lt+++++SHLQkYR++
  Traes_7AL_6279FCE8B.1  1 MGINSLTRHNIASHLQKYRSH 21
                           899****************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.9E-7124IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MGINSLTRHN IASHLQKYRS HRKHMIAREA EAASWTQRRQ MYAAGGPAAA VKRQDSNIWT  60
VPTIGFAPAH PPPPPPPSPA AMQHYVRPLH VWGHPTMDSP RMPMWPRHPM PRAPXXXVGS  120
PAAAAVRPGF LAPPLHEGAS SVYADPWDSL HGNADGTEIS CSSCARCHAV SSLHAPLHAI  180
SAGEQEPARI AAPATSTTIK REHRRGHR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. {ECO:0000269|PubMed:19808806}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light. {ECO:0000269|PubMed:11340194}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1054060.0EF105406.1 Triticum aestivum golden 2-like protein (Glk1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191527.14e-59probable transcription factor GLK1
SwissprotQ5Z5I46e-45GLK1_ORYSJ; Probable transcription factor GLK1
TrEMBLA0A453SAF55e-75A0A453SAF5_AEGTS; Uncharacterized protein
STRINGTraes_7AL_6279FCE8B.11e-145(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24153886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.14e-24GBF's pro-rich region-interacting factor 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Zhang Y, et al.
    A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes.
    Plant Methods, 2011. 7(1): p. 30
    [PMID:21961694]
  3. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]