PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_9A1395EC7.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 54aa    MW: 6277.27 Da    PI: 9.3699
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_9A1395EC7.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.62.1e-31254254
                G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
                           pr+rWt+eLH++F+eav+ LGG+++AtPk+il+lm+ kg++++hvkSHLQ+YR
  Traes_7AL_9A1395EC7.1  2 PRMRWTEELHRQFIEAVNCLGGQDEATPKRILQLMGAKGVSISHVKSHLQMYR 54
                           9***************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.215154IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-28254IPR009057Homeodomain-like
SuperFamilySSF466892.51E-17254IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-24254IPR006447Myb domain, plants
PfamPF002491.3E-10354IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 54 aa     Download sequence    Send to blast
EPRMRWTEEL HRQFIEAVNC LGGQDEATPK RILQLMGAKG VSISHVKSHL QMYR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A8e-20354354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-20354354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-20354354Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-20354354Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3716051e-56AK371605.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2138C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178889.15e-32putative Myb family transcription factor At1g14600
SwissprotQ700D92e-20MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLA0A3B6RLP52e-31A0A3B6RLP5_WHEAT; Uncharacterized protein
TrEMBLA0A446XUZ22e-31A0A446XUZ2_TRITD; Uncharacterized protein
TrEMBLA0A453SY611e-31A0A453SY61_AEGTS; Uncharacterized protein
STRINGTraes_7AL_9A1395EC7.19e-34(Triticum aestivum)
STRINGTRIUR3_34172-P15e-32(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.11e-22G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]