PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_A086258BE.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 158aa    MW: 17027.5 Da    PI: 4.8206
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_A086258BE.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.15.1e-101203655
                G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                           m+vk+Ltl+hvkSHLQ+YR+
  Traes_7AL_A086258BE.1  1 MDVKDLTLAHVKSHLQMYRT 20
                           9******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-8121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MDVKDLTLAH VKSHLQMYRT VKNTERPAAS SDQADGFENG SAGEICDDNL LDLRGGGRPE  60
ALAAATRNGR LAANDDDRSI GAGATHGGAL WNSSSREEDW SGFPCDSNNE SMQSFKDHMQ  120
SKSLEILSDI NSCLSETTSS ASAPNLDFTL GRPHQRRS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9570084e-50EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds.
GenBankKJ7268194e-50KJ726819.1 Zea mays clone pUT3358 G2-like transcription factor (GLK55) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178603.11e-108probable transcription factor KAN2
TrEMBLA0A3B6RFV81e-109A0A3B6RFV8_WHEAT; Uncharacterized protein
TrEMBLA0A446XHK61e-109A0A446XHK6_TRITD; Uncharacterized protein
STRINGTraes_7AL_A086258BE.11e-113(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-19G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]