PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_BF6FD97DA.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 108aa    MW: 12552.9 Da    PI: 8.9228
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_BF6FD97DA.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.22.4e-301871255
                G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           pr+rWt+eLH++F+eav+ LGG+++AtPk+il+lm+ kg++++h+kSHLQ+YR+
  Traes_7AL_BF6FD97DA.1 18 PRMRWTEELHRQFIEAVDCLGGQDEATPKRILQLMGTKGVSISHIKSHLQMYRS 71
                           9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.9531474IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-281473IPR009057Homeodomain-like
SuperFamilySSF466893.94E-171672IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-241871IPR006447Myb domain, plants
PfamPF002492.9E-91970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MRGFERRDVR QYNRSDEPRM RWTEELHRQF IEAVDCLGGQ DEATPKRILQ LMGTKGVSIS  60
HIKSHLQMYR SSSSNNNNNN NPPHMSVNRC HDHCIDGNNT RTASSDRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-191772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-191772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-191772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-191772156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-191772257Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519401e-109JF951940.1 Aegilops speltoides clone TaMYB57 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178887.19e-60probable transcription factor KAN4 isoform X1
SwissprotQ700D92e-24MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLA0A453SYJ81e-58A0A453SYJ8_AEGTS; Uncharacterized protein
TrEMBLA0A453SYN26e-59A0A453SYN2_AEGTS; Uncharacterized protein
TrEMBLM8BIF22e-58M8BIF2_AEGTA; Putative Myb family transcription factor
STRINGTraes_7AL_BF6FD97DA.12e-76(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-25G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]