PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AS_7D1B721BD.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 81aa    MW: 8926.24 Da    PI: 6.5083
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AS_7D1B721BD.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.62.3e-105380128
                    NAM  1 lppGfrFhPtdeelvveyLkkkvegkkl 28
                           +ppGfrFhPt+eel+++yL+kkv+++++
  Traes_7AS_7D1B721BD.1 53 VPPGFRFHPTEEELLTYYLAKKVASQRI 80
                           69*********************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-104779IPR003441NAC domain
PROSITE profilePS5100514.5015381IPR003441NAC domain
PfamPF023654.9E-75477IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
LPIVGALHSG YSSVLFTLLF LVDPSISLTD RVEHTTHAKE GIMSISVNGQ SVVPPGFRFH  60
PTEEELLTYY LAKKVASQRI D
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3678015e-51AK367801.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2062J03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGTraes_7AS_7D1B721BD.12e-52(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16506913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.13e-17NAC domain containing protein 12
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]