PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7BL_EB1DCAB4B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 110aa    MW: 12514.7 Da    PI: 11.6857
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7BL_EB1DCAB4B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17.1e-1670110145
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAaka 45 
                            ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a
  Traes_7BL_EB1DCAB4B.1  70 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARA 110
                            59*******9.**********8.....334***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.00E-2470110No hitNo description
SuperFamilySSF541715.23E-1371110IPR016177DNA-binding domain
PfamPF008474.6E-971110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2171110IPR001471AP2/ERF domain
SMARTSM003807.8E-1371110IPR001471AP2/ERF domain
PROSITE profilePS5103217.37271110IPR001471AP2/ERF domain
PRINTSPR003675.2E-117283IPR001471AP2/ERF domain
PRINTSPR003675.2E-1194110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
LIFTGSSRAF APPHTTLLRH SSVEEAGLTL THSLALPHCL LIIPFPLPVL FPARESPLCI  60
LQRNMVQSKK KFRGVRQRHW GSWVSEIRHP LLKRRVWLGT FETAEEAARA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3748797e-94AK374879.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3079A21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5W4255e-24A0A1E5W425_9POAL; Ethylene-responsive transcription factor WIN1
STRINGTraes_7BL_EB1DCAB4B.17e-74(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-25ERF family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]