PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7BL_F20FD5D20.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 131aa    MW: 14183.9 Da    PI: 9.8085
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7BL_F20FD5D20.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.42.9e-3247101155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            ++rlrWt eLH +F+eav++LGG+++AtPk il++m+v+gLt++hvkSHLQkYRl
  Traes_7BL_F20FD5D20.1  47 RQRLRWTDELHGCFLEAVTRLGGPDRATPKGILRTMGVQGLTIYHVKSHLQKYRL 101
                            58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.48844104IPR017930Myb domain
SuperFamilySSF466893.23E-1846102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.3E-3146102IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-2648102IPR006447Myb domain, plants
PfamPF002495.4E-849100IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MYEPKPFPST GSAHSNPISH DQQIGPTANN AASNIGGNSS NNSFATRQRL RWTDELHGCF  60
LEAVTRLGGP DRATPKGILR TMGVQGLTIY HVKSHLQKYR LAKYIPDPTA SGDKLEKKDL  120
GNLLAGIESS P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A9e-2547104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-2547104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-2547104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-2547104158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP3304850.0KP330485.1 Triticum aestivum MYB transcription factor SM154 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148390.11e-91myb family transcription factor PHL7-like
RefseqXP_020148391.11e-91myb family transcription factor PHL7-like
SwissprotQ9SJW05e-40PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A3B6SJ174e-92A0A3B6SJ17_WHEAT; Uncharacterized protein
TrEMBLA0A446YNV14e-93A0A446YNV1_TRITD; Uncharacterized protein
TrEMBLA0A446YNY75e-93A0A446YNY7_TRITD; Uncharacterized protein
STRINGTraes_7BL_F20FD5D20.16e-94(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-39G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]