PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DL_A9EF00572.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 226aa    MW: 24846.7 Da    PI: 10.3133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DL_A9EF00572.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.28.2e-24111172159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDg +WrKYGqKe+++s+++r+Y+rCt++   +C ++++v+r+++d+ ++ +tY g H ++
  Traes_7DL_A9EF00572.1 111 LDDGQAWRKYGQKEIHNSKHSRAYFRCTHKydqQCAAQRQVQRCDDDEGMFRVTYIGVHACR 172
                            58***************************99999*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-2598174IPR003657WRKY domain
PROSITE profilePS5081119.152106174IPR003657WRKY domain
SuperFamilySSF1182901.57E-23107174IPR003657WRKY domain
SMARTSM007744.6E-33111173IPR003657WRKY domain
PfamPF031062.1E-21112171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MEAPLAQVTD DLIKGRELAT QLQGLLRDSP EAGGLIVDQI LHAFSRAIHA ARAAAAASTS  60
ERSSDVRSEV TDGASGGAKR KSASAAGGGN RRACRRRTQQ SSVVTKSMES LDDGQAWRKY  120
GQKEIHNSKH SRAYFRCTHK YDQQCAAQRQ VQRCDDDEGM FRVTYIGVHA CRDPAAAVAP  180
HLLHHLSGAA QGLHAXXXXR ARQRRYRYPW HHHQHGDGVR PAGHKA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-33101172169OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6654400.0EU665440.1 Triticum aestivum WRKY11 transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148215.11e-138probable WRKY transcription factor 70
TrEMBLA0A1D6CKW71e-137A0A1D6CKW7_WHEAT; WRKY transcription factor 146
STRINGTraes_7DL_A9EF00572.11e-160(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.19e-17WRKY DNA-binding protein 46
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]