PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_8E656BA43.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 137aa    MW: 14789.8 Da    PI: 10.1658
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_8E656BA43.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.14.1e-11117756128
                    NAM  56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + +fF++ ++k+ ++ ++ r +  g+W  + k++e+ +  g +vg  k L f     +kg++t Wvm+eyr 
  Traes_7DS_8E656BA43.1  11 GDRFFFTTCKSKNGSKLQSVRGAGGGTWTIQ-KTTEISH-AGVKVGEVKNLSFK----KKGKSTGWVMEEYRC 77 
                            3679*****************99*****966.6688988.899**********8....78899********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.069197IPR003441NAC domain
SuperFamilySSF1019415.75E-13795IPR003441NAC domain
PfamPF023653.0E-81376IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
YAPAPQAVSS GDRFFFTTCK SKNGSKLQSV RGAGGGTWTI QKTTEISHAG VKVGEVKNLS  60
FKKKGKSTGW VMEEYRCLLP EANVSDGVKV FCRMHLAQHA PDAARQESEA YKLQQQQPEA  120
VTPSTHAQKR PAPAAAA
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732721e-142AK373272.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3025L12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159483.11e-94uncharacterized protein LOC109744745
TrEMBLA0A453RBI34e-96A0A453RBI3_AEGTS; Uncharacterized protein
STRINGTraes_7DS_8E656BA43.12e-98(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-07NAC domain containing protein 58
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]