PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_E5A18AAA4.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 240aa    MW: 26601.6 Da    PI: 7.3259
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_E5A18AAA4.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-1073114546
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                            k +rr+++NReAAr+sR RKka++++Le+   +L+   ++L+
  Traes_7DS_E5A18AAA4.1  73 KTARRLAQNREAARKSRIRKKAYLAQLENSRSKLTHLEQELQ 114
                            889**************************9999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.7E-866116No hitNo description
SMARTSM003381.3E-669163IPR004827Basic-leucine zipper domain
PfamPF077163.6E-771115IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.34771115IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-773116No hitNo description
PROSITE patternPS0003607691IPR004827Basic-leucine zipper domain
PfamPF141441.1E-21153216IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MPRAAAQQLE NWGDSLSGIV VTSPLTETST DLDDSGDKHH ALMGGGGAGA GGGAHSQRRV  60
GCADSSERTG DEKTARRLAQ NREAARKSRI RKKAYLAQLE NSRSKLTHLE QELQRARQQG  120
IFIAGGGSGD CSSGGALAFD LEYARWLDDH QRHINNLRVA VIADMGDDEL RILVESVLLH  180
YDEFFRLKNL ATKSDVFHVL SGMWMSPAER FFMWLGXXXX XDPQGRFFMA TRTVLHLERP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155511.11e-132transcription factor TGAL3-like
SwissprotQ5Z6N91e-85TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A3B6RGJ41e-137A0A3B6RGJ4_WHEAT; Uncharacterized protein
STRINGTraes_7DS_E5A18AAA4.11e-172(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6063422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.52e-62TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]