PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_E98DB84F1.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 84aa    MW: 9721.19 Da    PI: 9.358
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_E98DB84F1.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.5e-07264274
                   FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74
                           f n Y+ e GF +r  k++ +  +++ t+++ vC ++gk+ +e+++         + r++C a++++ + +d+
  Traes_7DS_E98DB84F1.1  2 FLNLYSWEHGFGIRYGKNRLN-PDRRKTMQEIVCGCSGKPLRENTR---------SCRCECPAMIRLLRASDN 64
                           8899*************9998.6666899**********9987655.........99********99887654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
RFLNLYSWEH GFGIRYGKNR LNPDRRKTMQ EIVCGCSGKP LRENTRSCRC ECPAMIRLLR  60
ASDNGYPDLH LTDKAYTGSI WLLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198214.13e-34protein FAR1-RELATED SEQUENCE 11-like isoform X2
TrEMBLA0A452XIY29e-29A0A452XIY2_AEGTS; Uncharacterized protein
TrEMBLA0A452XJ322e-28A0A452XJ32_AEGTS; Uncharacterized protein
TrEMBLA0A453G8B52e-28A0A453G8B5_AEGTS; Uncharacterized protein
TrEMBLA0A453Q4004e-29A0A453Q400_AEGTS; Uncharacterized protein
STRINGTraes_7DS_E98DB84F1.14e-57(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6191991
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]