PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0002ss00360.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Nin-like
Protein Properties Length: 363aa    MW: 41769.6 Da    PI: 6.7515
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0002ss00360.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.21.3e-26235284352
             RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                        ++isl+dl +yF +pi +A+++L+v+lTvLKr+CR++GI+RWPhRkiksl
  Vang0002ss00360.2 235 AKISLSDLVQYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSL 284
                        589*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151919.77219304IPR003035RWP-RK domain
PfamPF020426.6E-22237284IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
LVFASFYQST LHASSYPLLI SHSHAIFHLF MDSSPTNNTT LLTNLLLFNN TVQPELMRSL  60
HVYRQGDEEE RAVEREFLFS ECGSYVEMQA TPILKFVKSH VSQVFQGYKN GVWLCIFAFH  120
DDHTPRFCRI PPLLLVSRNP KLQMVPNLLH DLHVIYKLDR KEEDKDTTLG STGEECQGNS  180
NNFQPSEKVF PVLDQDLNYL PYEEDESELL DNETDVESSP GLLGKKKRAP SDLVAKISLS  240
DLVQYFGMPI VEASRNLNVG LTVLKRKCRE FGIPRWPHRK IKSLDSLIHD LQEEAKSQEL  300
EDMEAAMAVA KRQRMLECEK ENIEKKPFMD IQTETKRFRQ DVFKRRHRAR AVGKHNSTVS  360
NT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0002ss00360.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0903770.0BT090377.1 Soybean clone JCVI-FLGm-4G14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017427598.10.0PREDICTED: protein RKD5 isoform X1
RefseqXP_017427599.10.0PREDICTED: protein RKD5 isoform X2
TrEMBLA0A0L9URA10.0A0A0L9URA1_PHAAN; Uncharacterized protein
TrEMBLA0A0S3T4120.0A0A0S3T412_PHAAN; Uncharacterized protein
STRINGXP_007157999.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.13e-86RWP-RK domain-containing protein